SNPlotyper is an analysis and visualization tool built on the rat SNP genotype data developed by the STAR consortium.

To help you make the most of the Rat SNP data we have collected links to the major SNP resources currently available along with links to some of the key publications describing rat SNPs or which make significant use of these SNPs in their analyses. Please let us know if there are other links and publications we should include.

Analyze Analyze & Visualize SNPs in a region Compare Calculate polymorphism % between strains Browse Find a SNP by its identifier

Rat SNP Resources STAR SNP Consortium SNP datasets dbSNP at NCBI funcSTAR CASCAD database Wellcome Trust Rat SNP resources Rat SNP Selector

Rat SNP Publications SNP and haplotype mapping for genetic analysis in the rat Nature Genetics 40, 560 - 566 (2008) A genome-wide panel for mapping and association studies in the rat BMC Genomics 9:95 (2008)